environmental predictors
and range of values in original observations
model type and object
outputs
model object
mean prediction
measure(s) of uncertainty
standard error, standard deviation (sd), confidence intervals (e.g., 5% and 95%), coefficient of variation (cv)…
Araújo, Miguel B., Robert P. Anderson, A. Márcia Barbosa, Colin M. Beale, Carsten F. Dormann, Regan Early, Raquel A. Garcia, et al. 2019. “Standards for Distribution Models in Biodiversity Assessments.”Science Advances 5 (1): eaat4858. https://doi.org/10.1126/sciadv.aat4858.
Kass, Jamie M., Gonzalo E. Pinilla-Buitrago, Andrea Paz, Bethany A. Johnson, Valentina Grisales-Betancur, Sarah I. Meenan, Dean Attali, et al. 2023. “Wallace 2: A Shiny App for Modeling Species Niches and Distributions Redesigned to Facilitate Expansion via Module Contributions.”Ecography 2023 (3): e06547. https://doi.org/10.1111/ecog.06547.
Zurell, Damaris, Janet Franklin, Christian König, Phil J. Bouchet, Carsten F. Dormann, Jane Elith, Guillermo Fandos, et al. 2020. “A Standard Protocol for Reporting Species Distribution Models.”Ecography 43 (9): 1261–77. https://doi.org/10.1111/ecog.04960.
Source Code
---title: "Metadata"subtitle: "Metadata standards for reproducible and stackable SDMs"---What standards [@araújo2019; @kass2023; @zurell2020] are required for models to be hosted?- input - input observations - environmental predictors\ and range of values in original observations - model type and object- outputs - model object - mean prediction - measure(s) of uncertainty\ standard error, standard deviation (`sd`), confidence intervals (e.g., 5% and 95%), coefficient of variation (cv)...