Function reference

Read

Functions for reading data.

Analyze

Functions for calculating indicators.

calc_indicators()

Calculate Biodiversity Indicators, including ES50 (Hurlbert index)

Visualize

Functions for visualizing indicators.

gmap_indicator()

Statically map indicators using ggplot

Data

Locally available datasets for running examples.

occ_1960s

OBIS occurrences, temporal sample for the 1960s

occ_1970s

OBIS occurrences, temporal sample for the 1970s

occ_1980s

OBIS occurrences, temporal sample for the 1980s

occ_1990s

OBIS occurrences, temporal sample for the 1990s

occ_1M

OBIS occurrences, global sample of 1 million records

occ_2000s

OBIS occurrences, temporal sample for the 2000s

occ_2010s

OBIS occurrences, temporal sample for the 2010s

occ_SAtlantic

OBIS occurrences, South Atlantic full regional sample

occ_fk

OBIS occurrences, Florida Keys full regional sample